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TRIMER: Transcription Regulation Integrated with Metabolic Regulation
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Sensitivity Analysis of Genome-Scale Metabolic Flux Prediction
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Salt supplementation-induced metabolic reprogramming in Streptomyces coelicolor
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Comparative genomics and physiology of the genus Methanohalophilus, a prevalent methanogen in hydraulically fractured shale
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … have worked to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … Workshop and Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental … works at a single-cell level as part of the JGI MicroScale Applications team. But on a recent lunch break, she …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   … logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … of the environmental conditions can be estimated. In short, the complexity of nutrients, constraints, etc. of … ), a DOE Office of Science User Facility, is supported by the Office of Science of the US Department of …
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Decrypting bacterial polyphenol metabolism in an anoxic wetland soil
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Mercury methylation by metabolically versatile and cosmopolitan marine bacteria
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The metagenomic basis of anammox metabolism in Candidatus ‘Brocadia fulgida’
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