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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research community.  … Ivanova leads the Functional Annotation team. MAGs significantly expanded the estimated diversity of Bacteria and … Seshadri said. “It’s a reminder of the urgency to cultivate new microbial species.” Targeted Explorations for …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … they used to validate their set of guide RNAs could be applied to other non-conventional organisms. Summary … and xylose — into fatty acids that could be used for renewable fuel. In fact, lipids can make up more than 90 …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in … have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new analysis takes a  … rot fungi, belonging to an elite group of decomposers that can break down all of wood’s components — cellulose, …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) … contaminants that interfere with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? … long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, …
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High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Nandita Nath
Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without …
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