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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be spotted with … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous … Blurring the Line Between Plasmids and Phages … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …
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Making a Lichen Together
… The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two main branches of … Asterochloris glomerata . To see how gene expression changes when living together versus apart, the team grew the …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar organisms, researchers … A study involving six brown rot fungi reveals the genomic changes Serpula lacrymans has undergone in adapting to …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s Operations … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … 2015 JGI Annual Meeting:   Francis Martin on how JGI has changed mycology, excerpted from his talk at the 2015 JGI … Genome Inside: THE Bioenergy Tree …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out … currently works to support understanding of plants, microbes and environmental communities that have relevance …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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JGI & KBase at PAG XXVII
… XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … Highlights from Genome of Miscanthus 7:45 PM Transcriptome Changes during Leaf Senescence in  Populus 8:03 PM Natural …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance … aren’t getting any smaller and we need to keep pace with changes in industry/DOE Advanced Scientific Computing …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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