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A metagenomic perspective on the microbial prokaryotic genome census
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … with names — but not doors — and robots handle a bunch of benchwork. …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … contains about 6% of the human genome . They discovered genes linked to conditions such as cardiovascular disease, … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of …
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Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
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A second special issue of Standards In Genomic Sciences from the Genomic Standards Consortium
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … to the chemicals that make species unique and different from one another. They are incredibly important to medicine, … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … archaea. Many of the samples shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …
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Diversity and genomic insights into the uncultured Chloroflexi from the human microbiota
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Meeting Report from the Genomic Standards Consortium (GSC) Workshop 8
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Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products
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