Results

Methane-fed microbial communities enriched from field-grown rice support diverse heterotrophic bacteria
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Genome diversity in Brachypodium distachyon: deep sequencing of highly diverse inbred lines
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Patterns and drivers of fungal community depth stratification in Sphagnum peat
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Host genotype controls ecological change in the leaf fungal microbiome
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … with excitement and determination as they came onsite. From data carpentry to science communications, their … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … and phylogenomics) and machine learning to find novel functions that may impact microbiome structure and … protists. These approaches enable novel insights into the diversity and important ecological roles of microeukaryotes …
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Genome and proteome analyses show the gaseous alkane degrader Desulfosarcina sp. strain BuS5 as an extreme metabolic specialist
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Microbial adaptability in changing environments
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de … Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and …
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You Can Move, But You Can’t Hide
… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to … to become an essential tool for researching global viral diversity. geNomad has already been downloaded thousands of …
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