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A metagenomic perspective on the microbial prokaryotic genome census
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Overview of Laboratory Workflows for Microbial Single-Cell Genomics
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This action triggers subsurface carbon …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately … entities that seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …
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Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
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Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables
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Opening doors to physical sample tracking and attribution in Earth and environmental sciences
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STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader ecosystem …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that … Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley … FastTree and identified 62 distinct AT groups. However, no single AT group was conserved across all species — a …
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Trent Northen
… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining … large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the Joint … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn …
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