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Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species
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Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants
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The core metabolome and root exudation dynamics of three phylogenetically distinct plant species
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Holo‐omics disentangle drought response and biotic interactions among plant, endophyte and pathogen
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … in the sequencing and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s … on understanding the origin, evolution, and diversity of plants and animals by combining computational genome …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … in his event remarks. “I feel that is something crucial to our success, and Ray has been that. That person needs … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You …
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Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon … viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Ian Blaby
… analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral … oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide …
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JGI@25: The Little Alga That Could
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with …
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Mapping Heat Resistance in Yeasts
… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute … of Lawrence Berkeley National Laboratory, aim to improve our understanding of fungal diversity by sequencing genomes …
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