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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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A Plant Root Atlas for Tracking Developmental Trajectories
… datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  …
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … Most Streptomyces species can produce roughly 30 secondary metabolites — chemical compounds not required for basic … Research program’s efforts in advancing genome-based biotechnology.  Researchers studying Streptomyces species or …
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Mapping the Earth’s Hidden Fungal Kingdom
… past billion years, fungi have spread quietly throughout our planet. From the deepest ocean floors to Antarctic … (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of … secondary metabolites, and other parts lists for biotechnology, bioenergy and biomaterials,” said Igor …
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Compendium of Metabolomic and Genomic Datasets for Cyanobacteria: Mined the Gap
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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You Can Move, But You Can’t Hide
… mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … A software tool  recently described in  Nature Biotechnology  called geNomad identifies and classifies MGEs … National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user facility at Berkeley …
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Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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