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… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not …

… process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these …

… UEC. As a user of the JGI and the Environmental Molecular Sciences Laboratory, another DOE user facility, she will … laboratory researchers. This will help the JGI shape its programs, capabilities, and resources to best meet the broad base of user community needs. …

… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo … the big stuff, well, the little stuff! People hold office hours and you can pop in and ask them questions about all … Wint, UC Merced JGI Mentors: Igor Grigoriev & Asaf Salamov, Fungal Program “Working at the JGI has reinforced my plans …

… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been … is of interest to the Department of Energy (DOE) Office of Science’s Biological and Environmental Research …

… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …

… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …

… representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with … and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks …

… provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome Trust … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … to human health. Three DOE national labs had people and resources focused on three human chromosomes: Lawrence Berkeley …