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… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …

… and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have … as input. Data analysis Q:  What types of analysis support does JGI provide for DNA modification detection? A:  DNA … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not …

… citrus, trifoliate orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now … ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes …

… on JGI policies and practices that affect users and their science including technical capabilities offered, proposal … Provide feedback and make recommendations on how the JGI Science Programs can best support the user community. Advise …

… accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … a widening circle of researchers whose work aligns with the DOE’s Biological and Environmental Research program …

… reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  …

… Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … data, and professional expertise to support the global research community in studies of complex biological and environmental systems. We optimize our service to the community through responsibly managing …

… between JGI and the Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley Lab. … engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with … (2015) where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area …

… address this issue, we launched a PPE Campaign to provide our colleagues with a visual representation of JGI PPE … is important that we follow these requirements and remind our colleagues to do the same. Check out our JGI trendsetters below to see examples of appropriate …

… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been … metabolism in microbes, particularly actinomycetes. His research activity is focused on developing and implementing … Savchenko, A., and Eltis, L.D. (2016) The activity of CouR, a MarR family transcriptional regulator, is modulated …

… accepts proposals for state-of-the-art functional genomics research from potential users who need help translating … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … deadline is July 31. You can learn more about our Community Science Program here .  …