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Waiting to Respire
… postdoctoral fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed … Program head Tanja Woyke of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … single study, with Matheus Carnevali and Schulz sharing co-first authorship. Their data suggests that the shared common …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … for researchers in this area. “Surprisingly, this was the first workshop of its kind on SIP metagenomics,” Malmstrom …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of biology, … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than … that figure is likely closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the … began to offer a window into viral existence. Along with highlighting the viruses in a given sample, …
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Rex Malmstrom
… group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon … in situ functional activities of specific microbial groups within complex communities.  The Microscale Applications … also carries out custom preparative work for difficult user projects, including those that require fluorescence …
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The endosymbiotic box of protective tricks
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, …
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Party in the Rhizosphere
There’s a party in the soil, and microbes are the VIPs. They’re feasting on the compounds that plants …
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