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Krishna Palaniappan
… for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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JGI User Executive Committee Expands
… and Kevin Solomon of the University of Delaware. Along with the existing UEC members, their areas of study span the … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on … at the University of Delaware. His lab is interested in how microbial communities can efficiently degrade complex …
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The Power of One, Amplified
… cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, … ago, a candidate bacterial lineage was identified from microbial and metagenome sequence data sets generated from a …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing … seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, …
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Tomas Tyml
Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …
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Marcel Huntemann
… calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on R&D projects. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue … things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are notoriously difficult …
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SIPs with Standards
Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a … reusable, and more insightful, for the future of studying microbial communities.   …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … that indicate repelled attempts to infect and lyse the microbial cells. This demonstration of the virus-host arms …
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IMG Webinar Series
Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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