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… series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

Populations of Antarctic lake microbial communities change with the seasons. The Science … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …

CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … transcription in bacteria. Using this technology, which combines an in vitro transcription assay with RNA … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led by researchers at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in … of Phage Impact on Microbial Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and …

To boost crops more efficiently in the future, the evolutionary past may hold key insights. The way that plants … processes both carbon and nitrogen. This research team combined computational and experimental approaches to look … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …

… data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. …