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Mapping the Earth’s Hidden Fungal Kingdom
… Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … of DNA base pairs, most fungal genomes contain fewer than 50 million — small enough that thousands can be sequenced …
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JGI on the 2020 Highly Cited Researchers List
… a consortium that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  … in  Nature Biotechnology that led to the release of 52,515 publicly-available microbial draft genomes generated … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … these boggy wetlands produces an estimated 5% of annual greenhouse gas emissions. Understanding how sphagnum, a … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … cracked open the genome of another polar species, the green alga Microglena sp. YARC, which also contains expanded …
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Forest Fungi, Seagrass, and a New View of Symbiosis
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and …
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JGI Announces 2026 Functional Genomics Recipients
… Ritu Singh, Jiaqi Tan, Claire Willing Each year, the Joint Genome Institute (JGI) accepts proposals for … and omics capabilities to enhance understanding of gene and genome function. Understanding these functions gives … are accepted year-round; the next deadline is Jan. 29, 2027.    …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy (DOE) partnered with …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … from their own genomes. One of these systems, the CRISPR-Cas9 system, is a powerful tool in gene editing, but many other …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, … Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team …
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JGI Announces 2025 New Investigator Portfolio
… a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will … plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  Proposals are accepted … call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November 2025 review. You can …
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