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Mateus Fiamenghi
… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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JGI User Executive Committee Expands
… how these changes affect the dynamics and functioning of ecosystems. She leads a recently approved CSP New Investigator … also interested in developing or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and …
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Antonio Camargo
… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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JGI on the 2020 Highly Cited Researchers List
… a consortium that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  … , Susannah Tringe , and Tanja Woyke  were part of a “big data” mining effort reported in  Nature Biotechnology that … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … sequence information to BER-funded activities of plant systems that make use of these resources will present on …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional way of …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … the goal is to create an entirely human-generated yeast genome. …
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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Jane Grimwood Named HudsonAlpha Genomics Chair
City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … soon after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos went on to … Hardworking Team Todd Anderson , Director of the Biological Systems Science Division at DOE Office of Biological and … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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