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The Surprising Structure of a Shrub Willow Sex Chromosome
… by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to M.O.). … Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and Development …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …
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Microbial Genomics & Metagenomics (MGM) Workshop
… designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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Dan Rokhsar
… and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics … 2018 Marthella Foskett Brown Chair, Computational Biology, …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Frederik Schulz
… of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and host … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Roux et al. (2018) Minimum Information about an Uncultivated Virus Genome …
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Four Researchers Join JGI User Executive Committee
… Bik is a recipient of the Community Science Program (CSP) New Investigator call. Through membership in the UEC, … decade in gene regulatory network projects supported by the CSP, and as part of microbiome research involving the … Eisen has been involved in many JGI projects, both as a CSP PI and as a collaborator. He previously held an adjunct …
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Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801T)
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Crops as Tough as World Cup Turf
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Ray Turner Completes Last Tour of Lab Duty at JGI
… his 15 years of his JGI/Berkeley Lab tenure, Ray kept the 50-year-old Walnut Creek functioning at a high level as JGI … roundtrip every day, conservatively estimated to be over 350,000 miles over 15 years). And for Ray’s prospective … Over the years, you’ve been a leader, a mentor, a trusted colleague and a good friend to so many of us. For me, …
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Fishing for Novel Cellulose Degraders
… tested the approach on bacterial laboratory models to set a reference for its performance, and then applied it to … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, … form of functional enrichment leading to the sequencing of genomes from either individual cells or consortia of cells,” …
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DAP-seq Drives Robust Mapping of Gene Regulation
… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, first … Berkeley National Laboratory. “These proteins’ binding preferences are very, very stable over long evolutionary …
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