The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
A most wanted list of conserved microbial protein families with no known domains
Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla
Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis
Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
Gone with a trace: cataloguing the disappearing gut microbes
Metagenomes from two microbial consortia associated with Santa Barbara seep oil
Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions
LmbE proteins from Bacillus cereus are de‐N‐acetylases with broad substrate specificity and are highly similar to proteins in Bacillus anthracis
Genetic Transfer in Action: Uncovering DNA Flow in an Extremophilic Microbial Community
Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer
