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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … their cells around this structure to facilitate sharing.  Recently, researchers have been able to study both sides of … JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early …
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CoverM: Read alignment statistics for metagenomics.
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Supercharging SIP in the Fungal Hyphosphere
… successfully automated aspects of a commonly-used process for studying microbial communities, with results published … with potential applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular … materials can be broken down for things like biomass and  biofuels . However, AMF and the microbial communities they …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Honey Bee Gut Microbiota Divvy Up Dinner
… in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … carries out its helpful metabolism: who’s responsible for what biochemical processes? Now, an international team … bacterial clades shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and …
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JGI announces 2025 Functional Genomics awardees
… Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who translate genomic information into biological function. Through our  CSP … systems to convert renewable feedstocks into advanced biofuels and chemicals, and harnessing biomineralization …
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Gene and genome duplications have contrasting impacts on biosynthetic and flower developmental pathways in California poppy
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JGI User Executive Committee Expands
… Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … seagrasses, considered marine flowering plants, and their microbiomes. She is exploring the seagrass rhizosphere in …
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The More the Merrier: Making the Case for Plant Pan-genomes
… staples and candidate bioenergy feedstock crops, are recent polyploids. Crop breeders have harnessed polyploidy to … researchers have sought to learn the origins, evolution and development of plant polyploids. A multi-institutional team … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … Tringe and Tanja Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) … colonization patterns in eelgrass . Igor Grigoriev’s recent work includes the discovery of anaerobic fungi’s …
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