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Annual Genomics of Energy & Environment Meeting
… basis to the worldwide scientific community can advance your research goals. Keynotes: M. Francesca Cotrufo, …
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IMA genome-F18
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … eukaryotic cells along with giant viruses. Almost all known virophage genomes share only four genes in common: … Office of Science facility, have increased the number of known high quality virophage genome sequences 10-fold …
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Microbial Genomics & Metagenomics (MGM) Workshop
… designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for … bioinformatic methods to bridge the gap from sequence to biology. …
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Bright luminescence of Vibrio fischeri aconitase mutants reveals a connection between citrate and the Gac/Csr regulatory system
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Self-Buffering system for Cost-Effective production of lactic acid from glucose and xylose using Acid-Tolerant Issatchenkia orientalis
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The Dynamic Influence of Subsurface Geological Processes on the Assembly and Diversification of Thermophilic Microbial Communities in Continental Hydrothermal Systems
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene … thus allowing them to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… are present in more than two copies, a condition known as polyploidy. The multiple copies arise from past … each ancestor is called a subgenome. Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their …
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Dan Rokhsar
… and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics … shifted from condensed matter physics to computational biology, genomics and evolutionary biology. Dr. Rokhsar’s research is focused on understanding …
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