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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI … requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI project, and the Functional …
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Frederik Schulz
… discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel insights into the diversity and important ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a … of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… 25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … Mendota data set, illuminating not just the highly-abundant microbes we expect to see, but also low-abundance … Large metagenomic surveys could lead to better predictive models of global climate. They may also provide a basic …
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Extracting the Secrets of Secondary Metabolites
… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … employing CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are … advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked … that flip genetic switches — bind DNA were limited to a few model species and involved slow, labor-intensive …
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Comparative Analysis of 126 Cyanobacterial Genomes Reveals Evidence of Functional Diversity Among Homologs of the Redox-Regulated CP12 Protein    
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: implications for the origin of vertebrate limbs
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Functional Characterization of Two Class II Diterpene Synthases Indicates Additional Specialized Diterpenoid Pathways in Maize (Zea mays)
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Association of functionally significant Melanocortin-4 but not Melanocortin-3 receptor mutations with severe adult obesity in a large North American case–control study
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