Search

Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before … bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … stable isotope probing pipeline identifies cross-kingdom interactions in the hyphosphere of arbuscular mycorrhizal …

Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial …

MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. …

In one article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …

Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to …

… for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational … hudsonalpha.org. … Reference genome of Setaria viridis … Datasets …

Researchers looked across many organisms to see that aminotransferase enzymes have evolved … small set because of their unique functional redundancy. To understand how founder AT enzymes became integral to core …

Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Undergraduate Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran …

This series is the story of a giant metagenome assembly from Wisconsin’s Lake … a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge …

… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …

The ocean depths are vast and dark. But there are hotspots on the … researchers Anna-Louise Reysenbach, Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted to this extreme …

Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … organisms, modulating microbe-microbe and plant-microbe interactions in various environments to improve crop yield, …