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… have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …

… boggy wetlands produces an estimated 5% of annual greenhouse gas emissions. Understanding how sphagnum, a primary … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the … for protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US …

CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV identified a … information for an uncultivated virus genome. CheckV has already been applied to over 2.4 million viral genomes …

… sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … sequencing, they were able to identify the target genes of 11 sigma factors in Streptomyces coelicolor . The Impact As … efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were able to identify the associated …

… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of data, accessible through the Genome Portal. …

New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the … Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … Olmstead and Lawrence back on campus, Visel and Wang are already looking forward to opening the graduate internship …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two … an early algorithm and developing it in order to talk about the subgenome identity.”  These days, Session is …

… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long …

… from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were … after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce …

… and how ecosystems are adapting to stresses. A total of 17 proposals have been approved through the annual Community … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of 50 letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable …

… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … function in such extreme conditions. They identified 511 new or recently discovered genera of bacteria and … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 …