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This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: … Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …

… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … and analyze the single nuclei and spatial transcriptomics data this work leverages. These experiments focused on two … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …

… down potential biomass sources in ways we are only just beginning to understand. A better understanding of rumen … around the world, encompassing 54 researchers from 14 organizations across nine countries. Learn more about the Hungate1000 work led by AgResearch collaborators …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for …

… with excitement and determination as they came onsite. From data carpentry to science communications, their schedules … going forward. Watch this short video (below) to hear more about the summer from their own perspectives. The interns … JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy …

Communications , two research teams joined forces and data sets to describe bacterial genomes for related … and Saganbacteria were named for Carl Sagan, a renowned science popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then used to …

Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … give researchers a way to access much more information about fungi in these environments. “Now with these new tools …

…   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and … wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic …

… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, …

As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … other words, some like it hot; some do not. “We can think about the ocean, naively, as a sort of homogeneous medium. … and stark the biogeographic boundary is between them. The data is somewhat beautiful in that regard,” said Andy Allen, …

Using a novel computational approach, researchers confirm … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes …

… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … and analyze the single nuclei and spatial transcriptomics data this work leverages.   These experiments focused on two … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …