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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … in flowering plants, or angiosperms, suggesting they are evolutionarily conserved across plant lineages. They … Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… The Berkeley Lab Biosciences Area Entrepreneurship Program presents… Eyes on the Prize – … by Nigel Mouncey, Director, DOE Joint Genome Institute Read a synthesis from the panel discussion  here . Contact  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex Chromosomes in the Moss Ceratodon 7:09 PM …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since … before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … she set out to analyze 500 metagenomes from this sample set through the Community Science Program, it was the largest …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … their adaptations offers insights into microbial evolution, as well as how Antarctic microbial communities … biotechnological applications. The work has been enabled through the JGI Community Science Program (CSP) . …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … plates pull apart. As those plates separate, seawater seeps through cracks in the Earth’s crust and reacts with very hot …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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Horizontal Transfer of Entire Genomes via Mitochondrial Fusion in the Angiosperm Amborella
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Mitovirus and Mitochondrial Coding Sequences from Basal Fungus Entomophthora muscae
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … agriculture, biofuels and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of … “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to balance,” …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations for User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their …
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