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Viruses Reprogram Cells into Different Virocells
… metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so the adage goes, it must be a … looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … in understanding how, when and why microbes decide to produce which metabolites. … BS, Engineering, Tokyo Institute of … trove of microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. Mouncey NJ, Otani H, Udwary D, …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D … reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … of Science national user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome … one of the following focus topic areas: Biofuels and bioproducts, Biogeochemistry, and Inter-organismal interactions. …
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Tracking the Origins of Methane-Producing Microbes
Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … to have a substantial influence on the global carbon cycle. All methanogenic archaea use one of three pathways for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader …
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Virus-Microbe Interactions of Mud Island Mangroves
… will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … cycling in coastal mangroves. His work centers on samples collected on Mud Island – “it’s essentially a mud …
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At the Forefront of Terrestrial Virus Research
… co-advised by Drs. Virginia Rich and Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the whole cell are actually contained within a structure that has a membrane,” Volland said. “And this is very …
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IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science … can affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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