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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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JGI-UC Merced Interns Share Their 2021 Experiences
… the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in … Line Between Plasmids and Phages … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria … of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on Microbial Root … …
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Picking Up Threads of Cotton Genomics
… ( Gossypium hirsutum ), while the remaining 5 percent is called American Pima ( G. barbadense .) These are two of the … field, growers can easily distinguish the cotton species by traits such as flower color, plant height, or fiber … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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A Complex Confection Decoded: Sugarcane Reference Genome
The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar … the sugarcane cultivar R570 has been  published in  Nature by an international consortium. With the genetic code of … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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Cell by cell: population genetics in the wild
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Complete genome sequence of Coriobacterium glomerans type strain (PW2T) from the midgut of Pyrrhocoris apterus L. (red soldier bug)
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FICUS Overview
… synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … of results. … All proposals undergo technical review by JGI staff as well as staff at the other participating … review, proposals are evaluated and placed in rank order by the reviewers. The ranked proposal list, along with a …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
The traditional way of collecting them is through a method called Multiple Displacement Amplification, and most genomes … 30% complete.  Described in  ISME Communications , a method called Primary Template-Directed Amplification (PTA) yields … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy …
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User Support Analysis Group
… focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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Eelgrass Proves to Be Much Younger Than We Thought
… carbon sink capabilities.  … This study was supported by a PhD scholarship from the China Scholarship Council to … Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina …
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Pinning Down a Piece of Photosynthesis
… the Rube Goldberg machine of photosynthesis. Historically, this is a machine that has evaded direct experiments, … Blaby, through what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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