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Missing microbial eukaryotes and misleading meta-omic conclusions
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Maast: genotyping thousands of microbial strains efficiently
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Jane Grimwood Named HudsonAlpha Genomics Chair
… she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … the first time. A 2020 Nature Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also …
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Jeremy Schmutz
… eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed … of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. He provides … scientific project management for the reference eukaryotic genomes produced by the DOE Joint Genome Institute and the …
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … luminescens and its secondary metabolites work could yield new tools for pest control. Secondary metabolites are highly …
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes …
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DAP-seq Drives Robust Mapping of Gene Regulation
… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … sequences are moving around, disappearing and appearing in new places.” With new insights available, the power grid of gene regulation is …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR … that indicate repelled attempts to infect and lyse the microbial cells. This demonstration of the virus-host arms …
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Cultivating Symbiotic Antarctic Microbes
… cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … , a team led by Rick Cavicchioli at the University of New South Wales along with researchers at the U.S. …
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