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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A … at Lawrence Berkeley National Laboratory (Berkeley Lab). In their analysis, they found the salinity changes led the …
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Soil virus offers insight into maintaining microorganisms
… researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … that break down chitin. A protein tree was then constructed with the sequence data to compare viral chitosanases …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive understanding of complex … earth, and environmental systems for energy and infrastructure security. In complement to the Community Science …
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Partners
… science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase … with other user facilities enable the ability to leverage their capabilities through the Facilities Integrating …
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Tracing the Evolution of Shiitake Mushrooms
… in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their … genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … for converting plant waste into sugars for  biofuel production. Additionally, these fungi play a role in the global  …
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Genome Insider
… Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … computational analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input … advice on JGI policies and practices that affect users and their science including technical capabilities offered, …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … genome size. The obligate symbiont’s genome is often reduced compared to that of a free-living organism. First … extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new … most powerful light microscope, and fickle, often hiding their function from even the most determined scientist.  … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … bacterium, along with its life cycle. For most bacteria, their DNA floats freely within the cytoplasm of their cells. … the whole cell are actually contained within a structure that has a membrane,” Volland said. “And this is very …
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