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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… to academic, government agency, non-profit, and industry researchers worldwide.  Q:  To what extent is natural soil a … data (secondary metabolomics), how can we map it into these networks? A: We use networks based on the … in South Africa, How can this team be of help to us in research design and execution? A:  Human health is outside …
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Boosting Small Molecule Production in Super “Soup”
As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of Texas at … yeast cells but then moves out of the cell structure into a cell-free system. The work complements efforts to … arriving every couple of months. The question for the researchers was, would the reactions in these engineered …
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JGI Accepts 17 Proposals for Community Science Program
… wildfire.  Eight of the approved proposals are led by researchers, including Nelson and Roth, who have not been a … Ederson Jesus of Embrapa, Brazil’s public agricultural research corporation, is focused on microbial interactions …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal Science. It … vital to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs — into genes … scientists.”  Using samples of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… heavily invested in being the bridge to help scientists and researchers achieve their analysis goals. Offering this tool … stitch the pieces together and attempt to put them back into the original genomes. These metagenome-assembled … cell’s genome is missing from the final assembly. So while researchers are confident all the DNA sequences came from …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which … to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and … growth rates, decomposition, and carbon sequestration. Researchers wanted to better understand how sphagnum adapts …
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Tanja Woyke Elected to American Academy of Microbiology
… was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell … Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of California, Riverside, and virus ecology researcher Matt Sullivan of The Ohio State University. Luis …
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Supercharging SIP in the Fungal Hyphosphere
… novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … Applying this method to the study of a particular fungi, researchers identified novel interactions between bacteria … of land plants, which means they offer a lot of insights into how plant materials can be broken down for things like …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… rumen and the microbes that live there can drive solutions into stemming methane-emissions as well as efficient … of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen … Science Program proposal that started six years earlier, researchers put together what they called the Hungate1000, a …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… early collaborations that could help crop breeders and researchers predict how crops and model organisms may … he can use what they’ve developed here to further future research and answer complex questions. …
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Fishing for Novel Cellulose Degraders
… specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of … potential applications to industrial processes. Summary JGI researchers developed a function-driven, single-cell screen … “hook” of fluorescence-activated cell sorting to sort cells into several small pools, followed by whole genome …
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