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… of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … using techniques that the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative … genomes (MAGs) reconstructed from sequenced environmental samples in a previous study. The team analyzed over 80,000 …

… in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … Using metagenomes recovered directly from environmental samples and cultivated microbes, researchers have been able … growth because they had larger genome sizes and their cells were not observed to associate with host cells. In …

The group performs custom analysis and develops automated pipelines for analysis of resequencing, transcriptome, … et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. …

… only able to clearly identify what falls within that single beam. When it comes to microbial communities, … ‘Dark Matter’ Microbial communities living everywhere from soils and stomachs to the deep sea are capable of doing a … of these communities via whole genome sequencing of the samples, without being able to distinguish which gene …

… of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … handling 18 different species is beyond the capacity of a single lab. Growing different species poses significant … descriptions from nearest phylogenetic neighbors. Our pipeline allowed us to add expression-derived additional …