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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … earth, and environmental systems for energy and infrastructure security. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries …
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Finding the Fermenters
… to convert food into energy. However, in environments with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Partners
… The JGI leverages its existing partnerships and develops others … as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase …
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Cultivating Symbiotic Antarctic Microbes
… of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … genome size. The obligate symbiont’s genome is often reduced compared to that of a free-living organism. First …
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BBMerge – Accurate paired shotgun read merging via overlap
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Meraculous: De Novo Genome Assembly with Short Paired-End Reads
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … to balance its  Data Release and Utilization Policies with the DOE mandate to provide data access widely to the … facilitating the open use of data for the benefit of the worldwide research community. …
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Genome Insider
… Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … community, and promotes communication and collaboration within the user community. …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … two polysaccharides can yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota to produce these enzymes to break down polysaccharides. But …
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