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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for … Brachypodium distachyon is a small annual grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … features and functions. Making connections between the structures and functions of the genes encoded in the genome … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Gotta Catch 'Em Gall
… Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So … into wasps that program oak trees to raise their young in structures called galls.  In this episode, hear from Kasey …
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Genome Sequence of the Chestnut Blight Fungus Cryphonectria parasitica EP155: A Fundamental Resource for an Archetypical Invasive Plant Pathogen.
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced … Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … were directly assigned to the two of us just to get the structure set up and collect the first round of feedback …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. Despite advances in sequencing technologies and computational methods in the … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, … AB in Physics, Princeton University, NJ MS in Theoretical … Publications … 2018 Marthella Foskett Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, …
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Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal symbiotic lifestyles found in … Antarctic Science program (project 4031). The work conducted by the US Department of Energy Joint Genome …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley … Computing Center, the Molecular Foundry and the Advanced Light Source, future collaborative research projects were … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … secondary metabolites within a lab environment, shining a light into this “biological dark matter.”  It also offers …
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