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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … family transcriptional regulator, is modulated through a novel mechanism. Nucleic Acids Res. 44, 595-607. Otani, H., … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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The Sphagnome Project: enabling ecological and evolutionary insights through a genus‐level sequencing project
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Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes
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IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses
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Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient
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Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … of land plants, which means they offer a lot of insights into how plant materials can be broken down for things like …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … used CRAGE to engineer domesticated bacterial strains with novel biosynthetic gene clusters (BGCs). BGCs make diverse …
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