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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Through the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified … with JGI’s help. Additionally, the Marsarchaeota comprise 20-50 percent of the iron-oxide microbial mat communities in … were performed on the Hyalite High-Performance Computing System, operated and supported by MSU’s Information …
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Exometabolomic Analysis of Cross-Feeding Metabolites
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An integrated workflow for phenazine-modifying enzyme characterization
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … Relevant Links: Publication: Wint R et al. Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals …
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Natural Prodcast Episode 22: Alison Narayan
… has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our … so starting from some of the enzymes that we had the most data on and knew the most about, working with my … You can really design your experiments in a way that’s data rich, and you can really just learn so much, which then …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
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