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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone
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A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey
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Bioenergy sorghum nodal root bud development: morphometric, transcriptomic and gene regulatory network analysis
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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains
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Population genomics and climate adaptation of a C4 perennial grass, Panicum hallii (Poaceae)
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A Pleiotropic Flowering Time QTL Exhibits Gene-by-Environment Interaction for Fitness in a Perennial Grass
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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Corals in Hot Water Get Help From Their Microbes
… As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a coral host, a photosynthetic microalgae, and a …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material directly from … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to include a dedicated section for …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome … on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax – genomes that have …
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