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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May 2019, …
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Transcription Factor Amr1 Induces Melanin Biosynthesis and Suppresses Virulence in Alternaria brassicicola
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of … .) Nayfach also worked with another team on predicting host-virus connections between all viruses in  IMG/VR (Virus) and … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … diversity and gene expression. Sailing from pole to pole on four research cruises, they dipped their self-closing …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … organisms make use of cellulose and hemicellulose is well-established: Across all life forms and with little …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial … Nigel Mouncey is the Secondary Metabolites Program head as well as our JGI Director. Click to learn more about the program's areas of focus, …
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Functional Metagenomics of Spacecraft Assembly Cleanrooms: Presence of Virulence Factors Associated with Human Pathogens
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC … Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When … diversity has doubled, but in reality it could be three or four or five or tenfold more out there.” Digging Further …
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Escalation in the host-pathogen arms race: A host resistance response corresponds to a heightened bacterial virulence response
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … polymorpha. Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations … and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. (80|PRIME …
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