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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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JGI User Executive Committee Expands
… Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … generating libraries of large gene families to understand enzyme activity. As another early career researcher on the …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… artificial intelligence to aspects of research questions Another intern summer has closed at the U.S. Department of … Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve … Kelly Mentors: Kyra Eyerman, Hualan Liu Project:  Promoter Characterization of the Bacillota Bacterial Phylum Saray …
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New Research Sheds Light on Diversity in the Deep Sea
… living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, … studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International … infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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JGI at the AGU Fall Meeting
… the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting here. Here are some … of nitrous oxide pulses in rewetted forest soils: An integrated -omic and isotopic approach” 12:39pm Convention … (lightning talk): “Applying Data Standards and Reproducible Workflows To Advance Earth System Science” 11:18am …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … virus sequences vary widely. In a previous effort, an international consortium recommended specific … an incomplete picture of a virus, and for viruses that have integrated into the host genome, these sequences may be …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota to produce …
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Mapping the Earth’s Hidden Fungal Kingdom
… comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over the past billion … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … recognized this opportunity early, developing standardized workflows to produce high-quality, comparable genome …
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Marine Microbe Contains Multitudes
… The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific Subtropical Gyre, microbes … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … software suite, BBTools , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint … Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or …
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