The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes
Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi
Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence
Cross-species functional diversity within the PIN auxin efflux protein family
Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
Genomics of wood-degrading fungi
Population genomics and climate adaptation of a C4 perennial grass, Panicum hallii (Poaceae)
Comparative Genomics Analysis of Trichoderma reesei Strains
Functional Characterization of Two Class II Diterpene Synthases Indicates Additional Specialized Diterpenoid Pathways in Maize (Zea mays)
Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream
The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa
