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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses … prediction approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely …
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Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates
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Intraspecific comparison and annotation of two complete mitochondrial genome sequences from the plant pathogenic fungus Mycosphaerella graminicola
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Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta
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Complete Genome Sequence of Lactobacillus buchneri NRRL B-30929, a Novel Strain from a Commercial Ethanol Plant
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Microbial community analysis of three hydrocarbon reservoir cores provides valuable insights for the assessment of reservoir souring potential
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, including … a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … the importance of supporting fundamental, creative research projects to advance our understanding of the natural world,” …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… food webs in cold, but fecund polar waters. “A lot of our food comes from the North Atlantic, North Pacific and … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric called …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research … graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in California’s …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… Computational Science Graduate Fellowship (DOE CSGF) program was developed to meet the Nation's growing need for science and technology professionals with advanced … about the DOE Computational Science Graduate Fellowship Program at http://www.krellinst.org/csgf/ . …
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