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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … of environmental challenges, characterizing viruses is a key step. For decades, though, many viruses have been …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … 53 patents have cited that genome. Since publishing that original reference genome, the JGI has also continued to …
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What Happens To a Rainforest When You Dial Up Drought?
Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This …
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Expanding Virophage Diversity
… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Virus)—for the virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, … Paez-Espino  discussed an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … properties in themselves. For example, a few organisms originally sequenced in the Hungate1000 collection harbor …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration departments. He previously … on the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley Lab in this UC-wide staff …
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … floor and along ocean shores. Their results could bring key insights into how our planet’s nutrient cycles are …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … published over the last half-dozen years, on the ancestral origins of  Citrus sinensis , the sweet orange.     … …
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JGI at the AGU Fall Meeting
Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating … talk): “Predators of the Deep: virus-host dynamics in the terrestrial subsurface” 2pm Convention Center, Poster Hall …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the … Understanding how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, … You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere microbiomes, …
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