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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Allen Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National Laboratory’s Sustainable Systems Scientific Focus Area funded by the US Department of Energy … (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: 10.46936/10.25585/60000800 ) conducted by the U.S. …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides mccartyi and  … genome sequencing and analysis, the researchers identified other bacteria and microbial processes that support … samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were sequenced …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and illuminates the … sex. They are also the smallest sex chromosomes ever identified in the plant kingdom. Specifically, researchers found … preserving peatlands in the face of a warming climate. Identifying these sex chromosomes and their role in sphagnum’s …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… U.S. Department of Energy under contract no. DE-AC02-05CH11231. This research used resources of the National Energy … R.C. was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program … Environmental Research (DE-SC0004632, DE-SC0010580, DE-SC0016440), and acknowledge the IsoGenie Project Team. S.R., …
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The JGI announces 2024 awardees for our Community Science Program annual call
… proposed research that addresses various important scientific questions relevant to the DOE’s mission, and I look …
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Scaling Up Existing Skill Sets
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… postdoc Jarrod Chapman, developed a method to correctly identify polyploid subgenomes without needing to know the … interesting,” Session said.  The Kmer Subgenome Identification method can be  accessed here so that, Session … candidate ancestors are available. Our method clearly identifies the four subgenomes based on non-genic sequences.”  …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… potential of this collaboration stating, “We already identified a lot of synergies. To bring together expertise of … will give us the opportunity to advance unique scientific knowledge and address global challenges.”  During the … Lab, including the JGI, the National Energy Research Scientific Computing Center, the Molecular Foundry and the …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. This work was supported in part by NIH grants DP2 OD008677 and R01 GM124589, NIH training grant T32 GM066698, and UC Berkeley …
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Eelgrass Proves to Be Much Younger Than We Thought
… the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the … from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz School for … of Energy operated under Contract No. DE-AC02-05CH11231. Field sampling was supported by the National Science …
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JGI@25: Solving the Mystery of the Missing Oil
… The JGI’s single cell genomics expertise led to the identification of a new “oil-seeking” species related to …
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