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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful …
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A reference genome for common bean and genome-wide analysis of dual domestications
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Metagenome of a Versatile Chemolithoautotroph from Expanding Oceanic Dead Zones
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Virus Discoveries that Keep Getting Bigger
… quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments all over … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … , diversity exists in infectious cycles, as well, with viruses relying on different strategies for initiation, …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor … Corymbia are more abundant in the drier parts of Australia with lower quality soils and even in the desert areas with … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms … inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Frederik Schulz
… the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … B.Sc. Biochemistry, University of Applied Sciences Mannheim (Germany) M.Sc. Molecular Microbiology, …
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How Maize Makes An Antibiotic Cocktail
… it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) produces a plethora of … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … Plants that the zealexin pathway has an “hourglass” shape with diverse precursors in, and many different products out, …
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for … Department of Energy (DOE) Bioenergy Research Center, along with researchers from the Energy Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available …
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Genomic adaptations of the halophilic Dead Sea filamentous fungus Eurotium rubrum
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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’
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