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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Institute, a DOE Office of Science User Facility, is supported under Contract No. DE-AC02-05CH11231. JRS is supported by the NASA Astrobiology Institute Rock Powered …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … down potential sources of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved … was over 95% successful at classifying the fungal genomes Support Vector Machine (SVM)-based prediction of lifestyle …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional … that we studied are involved in transfer of the amine group, or the N group, to a variety of different molecules. So …
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JGI-KBase Panel at SACNAS
… contribution they make, whether as part of a course or internship, and before ever publishing a research article. …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… in both genome content and structure following a genome duplication event that occured some 60 million years ago. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … … Ceratopteris richardii on Phytozome Data portal … Datasets …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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Cataloging the Microbes that Manage the Health of River Systems
… systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … The team also provided several access points for these datasets. As part of a larger microbiome data integration hub, … could work across platforms. … This work was partially supported by awards from US Department of Energy (DOE) Office …
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Decoding Yellowstone’s Microbial Mats
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of …
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