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… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to …

Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the … for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …

Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … variants analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop …

Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … cone snails, C. californicus in particular, as a model system for venom-microbe interactions. Cone snail venom has a …

Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …

This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

RIViT-seq technology could speed up associating transcription factors with their target genes. The … on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of regulon … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

A workflow for capturing the genetic make-up of specific uncultivated microbes … Despite great strides in generating genome sequences for members of the microbial world through bulk community … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … experience, while others further along in their academic career enjoyed the chance to develop new skills needed …

… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … recently appeared in the Proceedings of the National Academy of Sciences (PNAS). Switchgrass, Panicum virgatum , is a …