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Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in … which she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position … of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist …
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A Grass Model to Help Improve Giant Miscanthus
… multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … Communications by an international, multi-institutional team. The work was a joint effort led by scientists at the … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Identification of Cellulose-Responsive Bacterial and Fungal Communities in Geographically and Edaphically Different Soils by Using Stable Isotope Probing
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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New and Improved: Eucalyptus Reference is Now Accessible
… compared to the 2014 Eucalyptus grandis reference genome that has been widely adopted. The new genome assembly resolves … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … genome assembly and annotation. Genome contiguity of the 2025 phased reference and 2014 diploid genome reference was …
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