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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied … to DNA methylation analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & sequencing …
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Gut Fungi: Unexpected Source of Novel Chemicals
… called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Graduate Students Get Thesis Research Opportunity at the JGI
… between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … Rambo added. Both Kaze and Rambo will start their projects after the JGI and KBase have settled into their new … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Fungus Fuels Tree Growth
… partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team … for the DOE. The work conducted by the DOE Joint Genome Institute, a DOE Office of Science User Facility, is …
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Disclaimer
… The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …
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JGI Announces 2025 New Investigator Portfolio
… researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted … these researchers will investigate a diverse array of projects, including the genomic dynamics of …
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Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium
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Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea
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