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Activity‐Informed Network Analysis Reveals Keystone Microbes Shaping Freshwater Ecosystem Function
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley … the JGI provided DNA synthesis capabilities to enable functional testing of these enzymes. Yasuo Yoshikuni, head …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … our understanding of life’s genomic code, advancing DOE efforts of achieving a predictive understanding of biological …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You … address some of the most pressing challenges of our time. For more information, please visit  …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … with previous studies in the same system. With the right functional characterization, those genes could become dials …
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Katherine Louie
… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to … for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds …
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The Expanding Universe of Methane Metabolisms in Archaea
… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the Institut … in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. Registration for …
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions
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