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Viral Genomics Group
… measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question … metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … towards specific phages and/or hosts. To that end, the JGI Viral Genomics group is exploring different approaches …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team …
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JGIota: Looking Back at Sequencing for Soybeans
… could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Boosting Small Molecule Production in Super “Soup”
… Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are partnering with Yasuo Yoshikuni and Ian Blaby of the DNA Synthesis Science Program . “This collaboration brings … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of the strawberry is …
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Ancient Algae Reveal Secrets of Plant Evolution
… Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the …
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Tina Clarke
… the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area … Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June 2017 – present Berkeley National …
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Boosting Small Molecule Production in Super “Soup”
… Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are partnering with  Yasuo Yoshikuni and  Ian Blaby of the  DNA Synthesis Science Program . “This collaboration brings … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
Learn more
Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … study? How many samples are typically involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established … discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be forwarded ( where possible ) to their … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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