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Changes in ambient temperature are the prevailing cue in determining Brachypodium distachyon diurnal gene regulation
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Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are … Plant microbiomes hold the amazing ability to influence plant development, fitness and …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex …
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … is part of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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DAP-seq Drives Robust Mapping of Gene Regulation
… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … plant lineages. Aligning with U.S. Department of Energy (DOE) interests, this advancement holds the potential to … Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, …
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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of firsts, including the flagship internship program between Alabama … success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific …   Internship Snapshots …
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XA21-mediated resistance to Xanthomonas oryzae pv. oryzae is dose dependent
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