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… Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center …

… . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the … information. According to Lawrence, this summer project aligned with his computational background and interests nicely. And although his work on this project was only the beginning of this much longer-term body …

… after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood … ) several years ago.   As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and …

… Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …

… Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …

… (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …

… N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … Community Science Program , allows us to work and share our tools with a widening circle of researchers whose work …

… the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) … of Science User Facility, for publicly available metagenome data provided by the other study co-authors, and … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis …

… of enzymes. It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized … screwdrivers in a toolkit. This way, these important tools are always around, regardless of malfunction or …

… a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to identify a … and his colleagues developed first worked on a reference dataset that included genome sequences known to be … of phage-bacterial coevolution and are also useful tools in CRISPR-Cas applications, but we are limited in our …

… such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic engineering … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …

… My project at the Joint Genome Institute (JGI) was to measure …